On MacOS you'll need to install your own version of diamond blast. You can do it using Homebrew as following : brew install diamond (OPTIONAL) you can an add alias to ...

This pipeline takes raw read data in the form of fastq files generated from Oxford Nanopore Technologies platforms, determines the most likely Dengue virus serotype by mapping initial reads to ...

A file of executable commands for Unix and Linux. Created in a text editor, when the file is run, each command is executed until the end of the file is reached. After the shell script is written, it ...

One of the delights in Bash, zsh, or whichever shell tickles your fancy in your OSS distribution of choice, is the ease of which you can use scripts. These can be shell scripts, or use the Perl, ...

You can store Linux commands as variables in shell scripts by using the syntax: VARIABLE_NAME=$(COMMAND_TO_BE_EXECUTED). Once you have saved the Linux command as a ...

Last time, I talked about what's known informally as l33t-speak, a series of letter and letter-pair substitutions that marks the jargon of the hacker elite (or some subset of hacker elite, because I'm ...

shc is a popular tool for protecting shell scripts that contain sensitive information such as passwords. Its popularity was driven partly by auditors' concern over passwords in scripts. shc encrypts ...